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“Multiple novel promoter-architectures revealed by decoding the hidden heterogeneity within the genome”, Nucleic Acids Research, vol. 42, no. 20, pp. 12388-12403, 2014.
, “One size does not fit all: on how markov model order dictates performance of genomic sequence analyses”, Nucleic Acids Research, vol. 41, no. 3, pp. 1416-1424, 2013.
, “MuMoD: a bayesian approach to detect multiple modes of protein-DNA binding from genome-wide ChIP data”, Nucleic Acids Research, vol. 41, no. 1, pp. 21-32, 2013.
, “ChIP-Seq data analysis: identification of protein-DNA binding sites with SISSRs peak-finder”, Methods in molecular biology, vol. 802, pp. 305-22, 2012.
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