biblio
, “Network structure and enzymatic evolution in Leishmania metabolism: a computational study”, in Proceedings of the International Symposium on Mathematical and Computational Biology-BIOMAT 2015, Roorkee, Uttarakhand, India, 2016.
, “Big Data Deluge in Biology: Challenges and Solutions”, Journal of Informatics and Data Mining, vol. 1, no. 2, pp. 1-3, 2016.
, “Comparison of codon usage bias across leishmania and trypanosomatids to understand mRNA secondary structure, relative protein abundance and pathway functions”, Genomics, vol. 106, no. 4, pp. 232-241, 2015.
, “Comparison of human cell signaling pathway databases-evolution, drawbacks and challenges”, Database-the Journal of Biological Databases and Curation, p. Article Number: bau126, 2015.
, “Data in support of large scale comparative codon usage analysis in leishmania and trypanosomatids”, Data Brief, vol. 4, no. C, pp. 269-272, 2015.
, “Differential suitability of reactive oxygen species and the role of glutathione in regulating paradoxical behavior in gliomas: a mathematical perspective”, PloS One, vol. 15, no. 6, p. e0235204, 2020.
, “Dissecting leishmania infantum energy metabolism - a systems perspective”, Plos One, vol. 10, no. 9, p. Article Number: e0137976, 2015.
, “Drug targets and biomarker identification from computational study of human notch signaling pathway”, Clinical and Experimental Pharmacology and Physiology, vol. 3, no. 4, 2013.
, “Dynamics of gli regulation and a strategy to control cancerous situation: hedgehog signaling pathway revisited”, Journal of Biological Systems, vol. 23, no. 4, pp. 681-719, 2015.
, “Effect of copper contamination on zooplankton epidemics”, Journal of Theoretical Biology, vol. 469, pp. 61-74, 2019.
, “Emerging landscape of molecular interaction networks: opportunities, challenges and prospects”, Journal of Biosciences, vol. 47, no. 2, p. 24, 2022.
, “Essential gene prediction using limited gene essentiality information-an integrative semi-supervised machine learning strategy”, PloS One, vol. 15, no. 11, p. e0242943, 2020.
, “Evolutionary perspectives of genotype-phenotype factors in leishmania metabolism”, Journal of Molecular Evolution, vol. 86, no. 7, pp. 443-456, 2018.
, “ Exploring immuno-regulatory mechanisms in the tumor microenvironment: model and design of protocols for cancer remission”, Plos One, vol. 13, no. 9, 2018.
, “Exploring notch pathway to elucidate phenotypic plasticity and intra-tumor heterogeneity in gliomas”, Scientific Reports, vol. 9, p. 9488, 2019.
, “Exploring the differences in metabolic behavior of astrocyte and glioblastoma: a flux balance analysis approach”, Systems and Synthetic Biology, vol. 9, no. 4, pp. 159-177, 2015.
, “Exploring the role of GS-GOGAT cycle in microcystin synthesis and regulation - a model based analysis”, Molecular Biosystems, vol. 13, no. 12, pp. 2603-2614, 2017.
, “Identification of potential microRNAs regulating metabolic plasticity and cellular phenotypes in glioblastoma”, Molecular Genetics and Genomics, vol. 298, pp. 161-181, 2023.
, “Identification of Th1/Th2 regulatory switch to promote healing response during Leishmaniasis: a computational approach”, EURASIP Journal on Bioinformatics and Systems Biology, vol. 1, 2015.
, “Integrative approaches to understand the Mastery in manipulation of host cytokine networks by protozoan parasites with emphasis on Plasmodium and Leishmania species”, Frontiers in Immunology, vol. 9, p. Article Number: 296, 2018.
, “Integrative machine learning strategy for improved prediction of essential genes in Escherichia coli metabolism using flux-coupled features”, Molecular Biosystems, vol. 13, no. 8, pp. 1584-1596, 2017.
, “Machine learning prediction of interaction energies in rigid water clusters”, Physical Chemistry Chemical Physics , vol. 20, no. 35, pp. 22987-22996, 2018.
, “Mechano-immunology in microgravity”, Life Sciences in Space Research, vol. 37, pp. 50-64, 2023.
, “Molecular basis of drug resistance in smoothened receptor: an in silico study of protein resistivity and specificity”, Proteins-Structure Function and Bioinformatics, 2019.
, “Optimal combinations of control strategies and cost-effective analysis for visceral leishmaniasis disease transmission”, PLoS ONE, vol. 12, no. 2, 2017.
, “Perspectives on leishmania species and stage-specific adaptive mechanisms”, Trends In Parasitology, vol. 34, no. 12, p. 10.1016/j.pt.2018.09.004, 2018.
, “Prediction of survival rate and effect of drugs on cancer patients with somatic mutations of genes: an AI-based approach”, Chemical Biology & Drug Design, vol. 96, no. 3, pp. 1005-1019, 2020.
, “Realistic host-vector transmission model for describing malaria prevalence pattern”, Bulletin of Mathematical Biology, vol. 75, no. 12, pp. 2499-2528, 2013.
, “Revealing the mystery of metabolic adaptations using a genome scale model of Leishmania infantum”, Scientific Reports, vol. 7, no. Article Number: 10262, 2017.
, “Structural and logical analysis of a comprehensive hedgehog signaling pathway to identify alternative drug targets for glioma, colon and pancreatic cancer”, Plos One, vol. 8, no. 7, p. e69132, 2013.
, “Structural insight of NICD-MAML interactions: virtual screening, docking and molecular dynamics study for the identification of potential inhibitor”, Letters in Drug Design & Discovery, vol. 13, no. 4, pp. 301-313, 2016.
, “Study of combinatorial drug synergy of novel acridone derivatives with temozolomide using in-silico and in-vitro methods in the treatment of drug-resistant glioma”, Frontiers in Oncology, vol. 11, p. 625899, 2021.
, “Temporal protein expression pattern in intracellular signalling cascade during T-cell activation: a computational study”, Journal of Biosciences, vol. 40, no. 4, pp. 769-789, 2015.
, “Understanding visceral leishmaniasis disease transmission and its control - a study based on mathematical modelling”, Mathematics, vol. 3, no. 3, pp. 913-344, 2015.