biblio

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2024
N. Kailash Gaur, Urankar, S., Sengupta, D., V. Chepuri, R., Makde, R. D., and Kulkarni, K., “Cell based assay using virus-like particles to screen AM type mimics for SARS-CoV-2 neutralisation”, BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS, vol. 718, p. 150082, 2024.
A. Omble, Mahajan, S., Bhoite, A., and Kulkarni, K., “Dishevelled2 activates WGEF via its interaction with a unique internal peptide motif of the GEF”, COMMUNICATIONS BIOLOGY, vol. 7, no. 1, p. 543, 2024.
A. Bhoite, Gaur, N. K., Palange, M., Kontham, R., Gupta, V., and Kulkarni, K., “Structure of epoxide hydrolase 2 from Mangifera indica throws light on the substrate specificity determinants of plant epoxide hydrolases”, Biochemical and Biophysical Research Communications, vol. 733, p. 150444, 2024.
2023
S. K. Rai, Gunnam, A., Roy, D., Rajput, R., Kulkarni, K., and Nangia, A. K., “Cocrystallization of multi-kinase inhibitor pazopanib with fenamic acids: improving dissolution and inhibiting cell migration”, CrystEngComm, vol. 25, no. 39, pp. 5565-5574, 2023.
N. K. Gaur, Ghosh, B., Goyal, V. Durani, Kulkarni, K., and Makde, R. D., “Evolutionary conservation of protein dynamics: insights from all-atom molecular dynamics simulations of `peptidase' domain of Spt16”, Journal of Biomolecular Structure and Dynamics, vol. 41, no. 4, pp. 1445-1457, 2023.
K. Suri, Rajput, N., Sharma, P., Omble, A. D., Kulkarni, K., and Gahlay, G. K., “In silico identification and characterization of the SNPs in the human ASTL gene and their probable role in female infertility”, Frontiers in Cell and Developmental Biology, vol. 11, p. 1151672, 2023.
Z. Motiwala, Sandholu, A. S., Sengupta, D., and Kulkarni, K., “Wavelet coherence phase analysis decodes the universal switching mechanism of Ras GTPase superfamily”, iScience, vol. 26, no. 7, p. 107031, 2023.
2022
D. Roy, Sengupta, D., and Kulkarni, K., “Substrate induced dynamical remodeling of the binding pocket generates GTPase specificity in DOCK family of guanine nucleotide exchange factors”, Biochemical and Biophysical Research Communications, vol. 631, pp. 32-40, 2022.
2021
S. Singh, ,, Sengupta, D., and Kulkarni, K., “Dynamic coupling analysis on plant sesquiterpene synthases provides leads for the identification of product specificity determinants”, Biochemical and Biophysical Research Communications, vol. 536, pp. 107-114, 2021.
Z. Motiwala, Darne, P., Prabhune, A., Inamdar, M. S., and Kulkarni, K., “Expression, purification and crystallization of Asrij, A novel scaffold transmembrane protein”, Journal of Membrane Biology, vol. 254, no. 1, pp. 65-74, 2021.
A. Omble and Kulkarni, K., “GPCRs that Rh oar the Guanine nucleotide exchange factors”, Small GTPases, pp. 1-16, 2021.
N. K. Gaur, Goyal, V. Durani, Kulkarni, K., and Makde, R. D., “Machine learning classifiers aid virtual screening for efficient design of mini-protein therapeutics”, Bioorganic & Medicinal Chemistry Letters, vol. 38, p. 127852, 2021.
T. Pucadyil, Kulkarni, K., and Sengupta, D., “Molecular interplay at the membrane and impact on cellular physiology”, Journal of Membrane Biology, vol. 254, no. 3, pp. 239-242, 2021.
2020
A. S. Sandholu, Mujawar, S. P., Ramakrishnan, K., Thulasiram, H. V., and Kulkarni, K., “Structural studies on 10-hydroxygeraniol dehydrogenase: a novel linear substrate-specific dehydrogenase from Catharanthus roseus”, Proteins-Structure Function and Bioinformatics, vol. 88, no. 9, pp. 1197-1206, 2020.
2018
A. S. Sandholu, Mohole, M., Duax, W. L., Thulasiram, H. V., Sengupta, D., and Kulkarni, K., “Dynamics of loops at the substrate entry channel determine the specificity of iridoid synthases”, Febs Letters, vol. 592, no. 15, pp. 2624-2635, 2018.
2017
A. Kumawat, Chakrabarty, S., and Kulkarni, K., “Nucleotide dependent switching in Rho GTPase: conformational heterogeneity and competing molecular interactions”, Scientific Reports, vol. 7, p. Article Number: 45829, 2017.
2015
N. B. Cronin, Yang, J., Zhang, Z., Kulkarni, K., Chang, L., Yamano, H., and Barford, D., “Atomic-resolution structures of the APC/C subunits Apc4 and the Apc5 N-terminal domain”, Journal of Molecular Biology, vol. 427, no. 20, pp. 3300-3315, 2015.
2014
A. Sandholu, Thulasiram, H. V., Sengupta, J., and Kulkarni, K., “Structural basis of Iridoid synthase mediated cyclization of 10-oxogeranial”, Acta Crystallographica A‐Foundation and Advances, vol. 70, p. C270, 2014.
Z. Motiwala and Kulkarni, K., “Structural studies on an atypical Rho GTPase RhoH”, Acta Crystallographica A‐Foundation and Advances, vol. 70, p. C389, 2014.