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P. Panigrahi, Sule, M., Ghanate, A., Ramasamy, S., and Suresh, C. G., “Engineering proteins for thermostability with iRDP web server”, Plos One, vol. 10, no. 10, p. e0139486, 2015.
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Y. Kumar, Zhang, L., Panigrahi, P., Dholakia, B. B., Dewangan, V., Chavan, S. G., Kunjir, S. M., Wu, X., Li, N., Rajmohanan, P. R., Kadoo, N. Y., Giri, A. P., Tang, H., and Gupta, V. S., “Fusarium oxysporum mediates systems metabolic reprogramming of chickpea roots as revealed by a combination of proteomics and metabolomics”, Plant Biotechnology Journal, vol. 14, no. 7, pp. 1589-1603, 2016.
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P. Panigrahi, Sule, M., Sharma, R., Ramasamy, S., and Suresh, C. G., “Improved method for specificity annotation shows a distinct evolutionary divergence among the microbial enzymes of the cholylglycine hydrolase family”, Microbiology-SGM, vol. 160, pp. 1162-1174, 2014.
R. Sharma, Panigrahi, P., and Suresh, C. G., “In-Silico analysis of binding site features and substrate selectivity in plant flavonoid-3-o glycosyltransferases (F3GT) through molecular modeling, docking and dynamics simulation studies”, Plos One, vol. 9, no. 3, p. e92636, 2014.
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Y. Kumar, Dholakia, B. B., Panigrahi, P., Kadoo, N. Y., Giri, A. P., and Gupta, V. S., “Metabolic profiling of chickpea-Fusarium interaction identifies differential modulation of disease resistance pathways”, Phytochemistry, vol. 116, pp. 120-129, 2015.
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R. Mukherji, Varshney, N. Kumar, Panigrahi, P., Suresh, C. G., and Prabhune, A., “New role for penicillin acylases: degradation of acyl homoserine lactone quorum sensing signals by Kluyvera citrophila penicillin G acylase”, Enzyme and Microbial Technology , vol. 56, pp. 1-7, 2014.
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P. Panigrahi, Chand, D., Mukherji, R., Ramasamy, S., and Suresh, C. G., “Sequence and structure-based comparative analysis to assess, identify and improve the thermostability of penicillin G acylases”, Journal of Industrial Microbiology & Biotechnology, vol. 42, no. 11, pp. 1493-1506, 2015.
V. Sunder Avinash, Panigrahi, P., Chand, D., Pundle, A., Suresh, C. Gopalan, and Ramasamy, S., “Structural analysis of a penicillin V acylase from pectobacterium atrosepticum confirms the importance of two Trp residues for activity and specificity”, Journal of Structural Biology, vol. 193, no. 2, pp. 85-94, 2016.
V. Sunder Avinash, Panigrahi, P., Suresh, C. G., Pundle, A. V., and Ramasamy, S., “Structural modelling of substrate binding and inhibition in penicillin V acylase from pectobacterium atrosepticum”, Biochemical and Biophysical Research Communications, vol. 437, no. 4, pp. 538-543, 2013.
D. Chand, Varshney, N. K., Ramasamy, S., Panigrahi, P., Brannigan, J. A., Wilkinson, A. J., and Suresh, C. G., “Structure mediation in substrate binding and post-translational processing of penicillin acylases: Information from mutant structures of Kluyvera citrophila penicillin G acylase”, Protein Science, vol. 24, no. 10, pp. 1660-1670, 2015.
D. Chand, Panigrahi, P., Ramasamy, S., and Suresh, C. G., “Structure of highly active BSH enzyme with subordinated post-translational excision”, Acta Crystallographica A‐Foundation and Advances, vol. 70, p. C272, 2014.