Expanding the Egbenema horizon: Novel species discovery in India and first complete genome assembly of the genus

TitleExpanding the Egbenema horizon: Novel species discovery in India and first complete genome assembly of the genus
Publication TypeJournal Article
Year of Publication2025
AuthorsBhagat, JM, Khilari, AA, Shanmugam, D, Patankar, M
JournalAlgal Research-Biomass Biofuels and Bioproducts
Volume90
Pagination104256
Date PublishedAUG
Type of ArticleArticle
ISSN2211-9264
Keywords16S rRNA, Biodiversity hotspots, Cyanobacteria, Egbenema bharatensis, ITS secondary structure, Northern Western Ghats, whole-genome sequencing
Abstract

The recognition of Egbenema bharatensis, a novel species of cyanobacteria from the Northern Western Ghats, extends the ecological and phylogenetic understanding of the genus Egbenema and highlights terrestrial microbial diversity of the region. Morphological characterization revealed resemblance with other Egbenema species but was inconclusive for definitive taxonomic classification. Preliminary phylogenetic analysis based on 16S rRNA gene sequences indicated affiliation with the genus but showed less than 98 % similarity to known species, pointing toward taxonomic distinctiveness. Analysis of the 16S-ITS region further supported this differentiation, revealing unique secondary structural features. Based on these findings, we propose the isolate as a novel species within Egbenema. Whole-genome sequencing provided full resolution and functional genome annotation revealed nitrogen fixation, cobalamin biosynthesis, and stress tolerance pathways, suggesting its metabolic versatility and potential biotechnological applications. The presence of multiple toxin-antitoxin systems also reflects its adaptability to environmental fluctuation. This study also presents the first complete genome of the genus Egbenema, filling a significant gap in cyanobacterial genomic resources. These findings encourage integrative taxonomic practices and affirm the significance of exploring biodiversity hotspots for uncovering cryptic microbial diversity with ecological and industrial potential.

DOI10.1016/j.algal.2025.104256
Type of Journal (Indian or Foreign)

Foreign

Impact Factor (IF)

4.5

Divison category: 
Biochemical Sciences
Database: 
Web of Science (WoS)

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