Ant-pro reverse-turn motif. structural features and conformational characteristics
Title | Ant-pro reverse-turn motif. structural features and conformational characteristics |
Publication Type | Journal Article |
Year of Publication | 2013 |
Authors | Thorat, VH, Ingole, TS, Vijayadas, KN, Nair, RV, Kale, SS, Ramesh, VVE, Davis, HC, Prabhakaran, P, Gonnade, RG, Gawade, RL, Puranik, VG, Rajamohanan, PR, Sanjayan, GJ |
Journal | European Journal of Organic Chemistry |
Issue | 17 |
Pagination | 3529-3542 |
Date Published | JUN |
ISSN | 1434-193X |
Keywords | Peptides, Peptidomimetics, Protein folding, Protein structures |
Abstract | This article details the characteristic conformational features of the Ant-Pro reverse turn ? a folded pseudo -turn motif that displays a closed nine-membered-ring hydrogen-bonded network involving just two amino acid residues, namely anthranilic acid (Ant; a constrained -amino acid), and proline (Pro; a constrained -amino acid). The results from the extensive investigation of ten crystal structures and their NMR conformations in the solution state provide a clear idea about the conformational characteristics of the Ant-Pro reverse turn. The Ant and Pro residues, which form the turn segment, maintain a perfect antiperiplanar orientation throughout, leaving little possibility for the formation of the otherwise possible six-membered hydrogen-bonding that requires a coplanar disposition of the two amino acid residues, as clearly evident from investigation of several crystal structures. The closed hydrogen-bonded network observed in the Ant-Pro reverse turn motif, formed in the forward direction of the sequence (12 amino acid interactions) involving only two amino acid residues, is in stark contrast to the native -turns that involve four residues to form hydrogen-bonded network featuring backward 14 amino acid interactions. The readily available two-residue Ant-Pro motif raises the possibility of a practical utility, particularly in the application of rigidifying flexible peptide backbones by inserting the robust Ant-Pro reverse turn motifs into their backbone. |
DOI | 10.1002/ejoc.201201739 |
Type of Journal (Indian or Foreign) | Foreign |
Impact Factor (IF) | 3.154 |