Synthesis and properties of 2 `-O-[R- and S-(2-amino-3-methoxy)propyl] (R-AMP and S-AMP) nucleic acids

TitleSynthesis and properties of 2 `-O-[R- and S-(2-amino-3-methoxy)propyl] (R-AMP and S-AMP) nucleic acids
Publication TypeJournal Article
Year of Publication2013
AuthorsKotikam, V, Kumar, VA
JournalTetrahedron
Volume69
Issue31
Pagination6404-6408
Date PublishedAUG
ISSN0040-4020
KeywordsAntisense therapeutics, MOE-AONs, Positively charged ON analogues
Abstract

Substitution at 2'-position by either amino- or methoxy-pendant groups of the antisense oligonucleotides (AONs) is known to enhance their therapeutic value. A simple modification is described here in which we introduce both these groups in the form of enantiospecific tethers at 2'-position. Practical synthesis of modified nucleosides using natural L-serine, en route to R-AMP- and S-AMP-AONs is presented. Such tethered ONs formed stable DNA:RNA duplexes and the stability was found to be marginally better than the methoxyethyl/methoxypropyl-substituted MOE/MOP-AONs. The stereochemistry of the tether effectively differentiated the hydrolytic cleavage of AONs and the R-AMP-AON was three times more stable than the S-AMP-AONs after 4 h. In comparison, the MOE- or MOP-AONs were almost completely digested by SVPD after 1 h. (C) 2013 Elsevier Ltd. All rights reserved.

DOI10.1016/j.tet.2013.05.104
Type of Journal (Indian or Foreign)Foreign
Impact Factor (IF)2.817
Divison category: 
Organic Chemistry