biblio

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2013
N. Kumar Varshney, Ramasamy, S., Brannigan, J. A., Wilkinson, A. J., and Suresh, C. G., “Cloning, overexpression, crystallization and preliminary X-ray crystallographic analysis of a slow-processing mutant of penicillin G acylase from Kluyvera citrophila”, Acta Crystallographica Section F-Structural Biology and Crystallization Communications, vol. 69, no. 8, pp. 925-929, 2013.
V. Sunder Avinash, Panigrahi, P., Suresh, C. G., Pundle, A. V., and Ramasamy, S., “Structural modelling of substrate binding and inhibition in penicillin V acylase from pectobacterium atrosepticum”, Biochemical and Biophysical Research Communications, vol. 437, no. 4, pp. 538-543, 2013.
2014
Y. Yadav and Ramasamy, S., “Allostery mapping in enterococcus faecalis Bile Salt Hydrolase (BSH)”, Acta Crystallographica A‐Foundation and Advances, vol. 70, p. C274, 2014.
A. Dipak Bendre, Ramasamy, S., and Suresh, C. G., “Chickpea Kunitz Inhibitor: a mechanistic basis for trypsin inhibition”, Acta Crystallographica A‐Foundation and Advances, vol. 70, p. C271, 2014.
M. S. Manu and Ramasamy, S., “Crystal structure of AtGet3 Delta L, a chloroplast Get3 from Arabidopsis thaliana”, Acta Crystallographica A‐Foundation and Advances, vol. 70, p. C1179, 2014.
D. Ghosh and Ramasamy, S., “Engineering of the tat pathway and chaperons”, Acta Crystallographica A‐Foundation and Advances, vol. 70, p. C273, 2014.
P. Panigrahi, Sule, M., Sharma, R., Ramasamy, S., and Suresh, C. G., “Improved method for specificity annotation shows a distinct evolutionary divergence among the microbial enzymes of the cholylglycine hydrolase family”, Microbiology-SGM, vol. 160, pp. 1162-1174, 2014.
D. Chand, Panigrahi, P., Ramasamy, S., and Suresh, C. G., “Structure of highly active BSH enzyme with subordinated post-translational excision”, Acta Crystallographica A‐Foundation and Advances, vol. 70, p. C272, 2014.
2015
A. J. Bhide, Channale, S. M., Patil, S. S., Gupta, V. S., Ramasamy, S., and Giri, A. P., “Biochemical, structural and functional diversity between two digestive alpha-amylases from helicoverpa armigera”, Biochimica Et Biophysica Acta-General Subjects, vol. 1850, no. 9, pp. 1719-1728, 2015.
P. Panigrahi, Sule, M., Ghanate, A., Ramasamy, S., and Suresh, C. G., “Engineering proteins for thermostability with iRDP web server”, Plos One, vol. 10, no. 10, p. e0139486, 2015.
V. Sunder Avinash, Ramasamy, S., Suresh, C. G., and Pundle, A., “Penicillin V acylase from pectobacterium atrosepticum exhibits high specific activity and unique kinetics”, International Journal of Biological Macromolecules, vol. 79, pp. 1-7, 2015.
P. Panigrahi, Chand, D., Mukherji, R., Ramasamy, S., and Suresh, C. G., “Sequence and structure-based comparative analysis to assess, identify and improve the thermostability of penicillin G acylases”, Journal of Industrial Microbiology & Biotechnology, vol. 42, no. 11, pp. 1493-1506, 2015.
D. Chand, Varshney, N. K., Ramasamy, S., Panigrahi, P., Brannigan, J. A., Wilkinson, A. J., and Suresh, C. G., “Structure mediation in substrate binding and post-translational processing of penicillin acylases: Information from mutant structures of Kluyvera citrophila penicillin G acylase”, Protein Science, vol. 24, no. 10, pp. 1660-1670, 2015.
2016
S. M. Channale, Bhide, A. J., Yadav, Y., Kashyap, G., Pawar, P. K., Maheshwari, V. L., Ramasamy, S., and Giri, A. P., “Characterization of two coleopteran alpha-amylases and molecular insights into their differential inhibition by synthetic alpha-amylase inhibitor, acarbose”, Insect Biochemistry and Molecular Biology, vol. 74, pp. 1-11, 2016.
D. Chand, Ramasamy, S., and Suresh, C. G., “Highly active bile salt hydrolase from enterococcus faecalis shows positive cooperative kinetics”, Process Biochemistry, vol. 51, no. 2, pp. 263-269, 2016.
V. Sunder Avinash, Pundle, A. Vishnu, Ramasamy, S., and Suresh, C. Gopalan, “Penicillin acylases revisited: importance beyond their industrial utility”, Critical Reviews In Biotechnology, vol. 36, no. 2, pp. 303-316, 2016.
V. Sunder Avinash, Panigrahi, P., Chand, D., Pundle, A., Suresh, C. Gopalan, and Ramasamy, S., “Structural analysis of a penicillin V acylase from pectobacterium atrosepticum confirms the importance of two Trp residues for activity and specificity”, Journal of Structural Biology, vol. 193, no. 2, pp. 85-94, 2016.
P. Yadav, Shahane, G., Ramasamy, S., Sengupta, D., and Gaikwad, S., “Structural-functional insights and studies on saccharide binding of Sophora japonica seed lectin”, International Journal of Biological Macromolecules, vol. 91, pp. 75-84, 2016.
2017
A. J. Bhide, Channale, S. M., Yadav, Y., Bhattacharjee, K., Pawar, P. K., Maheshwari, V. L., Gupta, V. S., Ramasamy, S., and Giri, A. P., “Genomic and functional characterization of coleopteran insect-specific alpha-amylase inhibitor gene from amaranthus species”, Plant Molecular Biology, vol. 94 , no. 3, pp. 319-332, 2017.
A. K. Suresh, Vijay, V., Hameed, B. S., Ramasamy, S., and Sakthivel, N., “Medium constituents mediated engineering for size and shape tuning of gold nanocrystallites”, Journal of Industrial and Engineering Chemistry, vol. 51, pp. 288-294, 2017.
A. Vellore Sunder, Utari, P. Dwi, Ramasamy, S., van Merkerk, R., Quax, W., and Pundle, A., “Penicillin V acylases from gram-negative bacteria degrade N-acylhomoserine lactones and attenuate virulence in Pseudomonas aeruginosa”, Applied Microbiology and Biotechnology, vol. 101, no. 6, pp. 2383-2395, 2017.
2018
A. D. Bendre, Ramasamy, S., and Suresh, C. G., “Analysis of Kunitz inhibitors from plants for comprehensive structural and functional insights”, International Journal of Biological Macromolecules, vol. 113, pp. 933-943, 2018.
M. S. Manu, Ghosh, D., Chaudhari, B. P., and Ramasamy, S., “Analysis of tail-anchored protein translocation pathway in plants”, Biochemistry and Biophysics Reports , vol. 14, pp. 161-167, 2018.
2019
S. Kishor Sonawane, Balmik, A. Ankur, Boral, D., Ramasamy, S., and Chinnathambi, S., “Baicalein suppresses repeat tau fibrillization by sequestering oligomers”, Archives of Biochemistry and Biophysics, vol. 675, p. 108119, 2019.
C. S. Bhatt, Nagaraj, B., Ghosh, D., Ramasamy, S., Thapa, R., Marpu, S. B., and Suresh, A. K., “Core-composite mediated separation of diverse nanoparticles to purity”, Soft Matter, vol. 15, no. 39, pp. 7787-7794, 2019.
D. Boral, Vankudoth, K. Rao, and Ramasamy, S., “Structural insight into a membrane intrinsic Acyltransferase from Chlorobium tepidum ”, Current Microbiology, vol. 76, no. 11, pp. 1290-1297, 2019.
A. D. Bendre, Suresh, C. G., Shanmugam, D., and Ramasamy, S., “Structural insights into the unique inhibitory mechanism of Kunitz type trypsin inhibitor from Cicer arietinum L. Vol. 37”, Journal of Biomolecular Structure & Dynamics, vol. 37, no. 10, pp. 2669-2677, 2019.
V. B. Rajput, Karthikeyan, M., and Ramasamy, S., “Zebrafish acid ceramidase: expression in Pichia pastoris GS115and biochemical characterization”, International Journal of Biological Macromolecules, vol. 122, pp. 587-593, 2019.
2020
D. Boral, Rao, V. Koteswara, and Ramasamy, S., “Archeal Di-O-geranylgeranyl glyceryl phosphate synthase of a UbiA superfamily member provides insight into the multiple human diseases”, Protein and Peptide Letters, vol. 27, no. 7, pp. 568-573, 2020.
S. Kishor Sonawane, Chidambaram, H., Boral, D., Gorantla, N. Vijay, Balmik, A. Ankur, Dangi, A., Ramasamy, S., Marelli, U. Kiran, and Chinnathambi, S., “EGCG impedes human Tau aggregation and interacts with Tau”, Scientific Reports, vol. 10, no. 1, p. 12579, 2020.
A. D. Bendre, Shukla, E., and Ramasamy, S., “Functional stability and structural transitions of a kunitz trypsin inhibitor from chickpea (CaTI2)”, Protein Journal, vol. 39, no. 4, pp. 350-357, 2020.
A. M. Sawant, Sunder, A. Vellore, Vamkudoth, K. Rao, Ramasamy, S., and Pundle, A., “Process development for 6-aminopenicillanic acid production using lentikats-encapsulated escherichia coli cells expressing penicillin V acylase”, ACS Omega, vol. 5, no. 45, pp. 28972-28976, 2020.
P. D. Philem, Yadav, Y., Sunder, A. Vellore, Ghosh, D., Prabhune, A., and Ramasamy, S., “Structural and enzymatic analysis of a dimeric cholylglycine hydrolase like acylase active on N-acyl homoserine lactones”, Biochimie, vol. 177, pp. 108-116, 2020.
A. Anjali, Fatima, U., Manu, M. S., Ramasamy, S., and Senthil-Kumar, M., “Structure and regulation of SWEET transporters in plants: an update”, Plant Physiology and Biochemistry, vol. 156, pp. 1-6, 2020.
2024
S. S. Shankar, Banarjee, R., Jathar, S. M., Rajesh, S., Ramasamy, S., and Kulkarni, M. J., “De novo structure prediction of meteorin and meteorin-like protein for identification of domains, functional receptor binding regions, and their high-risk missense variants”, Journal of Biomolecular Structure & Dynamics, vol. 42, no. 9, pp. 4522-4536, 2024.