P. M.  Chandra, Brannigan, J. A., Prabhune, A., Pundle, A., Turkenburg, J. P., Dodson, G. G., and Suresh, C. G., ?Cloning, preparation and preliminary crystallographic studies of penicillin V acylase autoproteolytic processing mutants?, Acta Crystallographica Section F-Structural Biology and Crystallization Communications, vol. 61, no. Part 1, pp. 124-127, 2005.

P.  Rathinaswamy, Pundle, A. V., Prabhune, A., SivaRaman, H., Brannigan, J. A., Dodson, G. G., and Suresh, C. G., ?Cloning, purification, crystallization and preliminary structural studies of penicillin V acylase from Bacillus subtilis?, Acta Crystallographica Section F-Structural Biology Communications, vol. 61, no. Part 7, pp. 680-683, 2005.

M. P.  Wadekar, Rode, C. V., Bendale, Y. N., Patil, K. R., and Prabhune, A., ?Preparation and characterization of a copper based Indian traditional drug: tamra bhasma?, Journal of Pharmaceutical and Biomedical Analysis, vol. 39, no. 5, pp. 951-955, 2005.

M. P.  Wadekar, Rode, C. V., Bendale, Y. N., Patil, K. R., Gaikwad, A. B., and Prabhune, A., ?Effect of calcination cycles on the preparation of tin oxide based traditional drug: studies on its formation and characterization?, Journal of Pharmaceutical and Biomedical Analysis, vol. 41, no. 4, pp. 1473-1478, 2006.

S.  R. Kumar, Brannigan, J. A., Prabhune, A., Pundle, A. V., Dodson, G. G., Dodson, E. J., and Suresh, C. G., ?Structural and functional analysis of a conjugated bile salt hydrolase from Bifidobacterium longum reveals an evolutionary relationship with penicillin V acylase?, Journal of Biological Chemistry, vol. 281, pp. 32516-32525, 2006.

A. A.  Bharde, Kulkarni, A., Rao, M., Prabhune, A., and Sastry, M., ?Bacterial enzyme mediated biosynthesis of gold nanoparticles?, Journal of Nanoscience and Nanotechnology, vol. 7, no. 12, pp. 4369-4377, 2007.

R.  Jagannathan, Poddar, P., and Prabhune, A., ?Cephalexin-mediated synthesis of quasi-spherical and anisotropic gold nanoparticles and their in situ capping by the antibiotic?, Journal of Physical  Chemistry C , vol. 111, no. 19, pp. 6933-6938, 2007.

P.  Shah, Sridevi, N., Prabhune, A., and Ramaswamy, V., ?Immobilization of Ntn hydrolases on APTES fuctionalized SBA-15?, in From Zeolites to Porous Mof Materials: the 40th Anniversary of International Zeolite Conference, Proceedings of the 15th International Zeolite Conference, Sara Burgerhartstraat 25, Po Box 211, 1000 AE Amsterdam, Netherlands, 2007, vol. 170, pp. 1891-1898.

M.  Kasture, Singh, S., Patel, P., Joy, P. Alias, Prabhune, A., Ramana, C. V., and Prasad, B. L. V., ?Multiutility sophorolipids as nanoparticle capping agents: synthesis of stable and water dispersible Co nanoparticles?, Langmuir, vol. 23, no. 23, pp. 11409-11412, 2007.

S.  Shah and Prabhune, A., ?Purification by silica gel chromatography using dialysis tubing and characterization of sophorolipids produced from Candida bombicola grown on glucose and arachidonic acid?, Biotechnology Letters, vol. 29, no. 2, pp. 267-272, 2007.

S.  R. Kumar, Prabhune, A., Pundle, A. V., Karthikeyan, M., and Suresh, C. G., ?Tryptophan residue is identified in the substrate binding of penicillin G acylase from Kluyvera citrophila?, Enzyme and Microbial Technology, vol. 40, no. 5, pp. 1389-1397, 2007.

A.  Kumar, Prabhune, A., Suresh, C. G., and Pundle, A., ?Characterization of smallest active monomeric penicillin V acylase from new source: a yeast, rhodotorula aurantiaca (NCIM 3425)?, Process Biochemistry, vol. 43, no. 9, pp. 961-967, 2008.

S. A.  Momin, Prabhune, A., Sonchal, B. P., Shah, S., and Kothekar, S. C., ?COLL 41-studies in biosurfactants: sophorolipids?, in  235th American-Chemical-Society National Meeting, 1155 16th ST, NW, Washington, DC 20036 USA, 2008, vol. 235, p. Meeting Abstract : 41 - Coll.

M. B.  Kasture, Patel, P., Prabhune, A., Ramana, C. V., Kulkarni, A. A., and Prasad, B. L. V., ?In situ synthesis of ligand reduced/capped silver nanoparticles and the effect of temperature and ligand structure on the size of silver nanoparticles?, Journal of Chemical Sciences, vol. 120, no. 6, pp. 515-520, 2008.

P.  Shah, Sridevi, N., Prabhune, A., and Ramaswamy, V., ?Structural features of Penicillin acylase adsorption on APTES functionalized SBA-15?, Microporous and Mesoporous Materials, vol. 116, no. 1-3, pp. 157-165, 2008.

N.  Sridevi and Prabhune, A., ?Brevibacillus sp: a novel thermophilic source for the production of bile salt hydrolase?, Applied Biochemistry and Biotechnology, vol. 157, no. 2, pp. 254-262, 2009.

S.  Singh, Patel, P., Jaiswal, S., Prabhune, A., Ramana, C. V., and Prasad, B. L. V., ?Direct method for the preparation of glycolipid-metal nanoparticle conjugates: sophorolipids as reducing and capping agents for the synthesis of water re-dispersible silver nanoparticles and their antibacterial activity?, New Journal of Chemistry, vol. 33, no. 3, pp. 646-652, 2009.

A.  Kumar, Singh, S., Poddar, P., Prabhune, A., and Pundle, A., ?Effect of cultural conditions and media constituents on production of penicillin V acylase and CTAB treatment to enhance whole-cell enzyme activity of rhodotorula aurantiaca (NCIM 3425)?, Applied Biochemistry and Biotechnology, vol. 157, no. 3, pp. 463-472, 2009.

N.  Sridevi, Vishwe, P., and Prabhune, A., ?Hypocholesteremic effect of bile salt hydrolase from Lactobacillus buchneri ATCC 4005?, Food Research International, vol. 42, no. 4, pp. 516-520, 2009.

R.  Jagannathan, Parmar, A. Singh, Adyanthaya, S. D., Prabhune, A., Muschol, M., and Poddar, P., ?In situ observation of antibiotic mediated concurrent growth of two distinct homogeneous populations of gold nanoparticles in solution phase?, Journal of Physical Chemistry C, vol. 113, no. 9, pp. 3478-3486, 2009.

A.  Rai, Prabhune, A., and Perry, C. C., ?Antibiotic mediated synthesis of gold nanoparticles with potent antimicrobial activity and their application in antimicrobial coatings?, Journal of Materials Chemistry, vol. 20, no. 32, pp. 6789-6798, 2010.

V.  Menon, Prakash, G., Prabhune, A., and Rao, M., ?Biocatalytic approach for the utilization of hemicellulose for ethanol production from agricultural residue using thermostable xylanase and thermotolerant yeast?, Bioresource Technology, vol. 101, no. 14, pp. 5366-5373, 2010.

D. V. Ravi Kumar, Kasture, M., Prabhune, A., Ramana, C. V., Prasad, B. L. V., and Kulkarni, A. A., ?Continuous flow synthesis of functionalized silver nanoparticles using bifunctional biosurfactants?, Green Chemistry, vol. 12, no. 4, pp. 609-615, 2010.

S.  Singh, D'Britto, V., Prabhune, A., Ramana, C. V., Dhawan, A., and Prasad, B. L. V., ?Cytotoxic and genotoxic assessment of glycolipid-reduced and -capped gold and silver nanoparticles?, New Journal of Chemistry, vol. 34, no. 2, pp. 294-301, 2010.

S.  Dhar, E. Reddy, M., Prabhune, A., Pokharkar, V., Shiras, A., and Prasad, B. L. V., ?Cytotoxicity of sophorolipid-gellan gum-gold nanoparticle conjugates and their doxorubicin loaded derivatives towards human glioma and human glioma stem cell lines?, Nanoscale, vol. 3, no. 2, pp. 575-580, 2011.

K.  Joshi-Navare, Shiras, A., and Prabhune, A., ?Differentiation-inducing ability of sophorolipids of oleic and linoleic acids using a glioma cell line?, Biotechnology Journal, vol. 6, no. 5, pp. 509-512, 2011.

J. B.  Kantak, Bagade, A. V., Mahajan, S. A., Pawar, S. P., Shouche, Y. S., and Prabhune, A., ?Isolation, identification and optimization of a new extracellular lipase producing strain of rhizopus sp.?, Applied Biochemistry and Biotechnology, vol. 164, no. 7, pp. 969-978, 2011.

G.  Prakash, Varma, A., Prabhune, A., Shouche, Y., and Rao, M., ?Microbial production of xylitol from D-xylose and sugarcane bagasse hemicellulose using newly isolated thermotolerant yeast Debaryomyces hansenii?, Bioresource Technology, vol. 102, no. 3, pp. 3304-3308, 2011.

V.  D'Britto, Kapse, H., Babrekar, H. A., Prabhune, A., Bhoraskar, S. V., Premnath, V., and Prasad, B. L. V., ?Silver nanoparticle studded porous polyethylene scaffolds: bacteria struggle to grow on them while mammalian cells thrive?, Nanoscale, vol. 3, no. 7, pp. 2957-2963, 2011.

J. B.  Kantak and Prabhune, A., ?Characterization of smallest active monomeric lipase from novel rhizopus strain: application in transesterification?, Applied Biochemistry and Biotechnology, vol. 166, no. 7, pp. 1769-1780, 2012.

N. Kumar Varshney, R. Kumar, S., Ignatova, Z., Prabhune, A., Pundle, A., Dodson, E. J., and Suresh, C. G., ?Crystallization and X-ray structure analysis of a thermostable penicillin G acylase from alcaligenes faecalis?, Acta Crystallographica Section F-Structural Biology and Crystallization Communications, vol. 68, pp. 273-277, 2012.

P.  Rathinaswamy, Gaikwad, S. M., Suresh, C. G., Prabhune, A., Brannigan, J. A., Dodson, G. G., and Pundle, A. V., ?Purification and characterization of YxeI, a penicillin acylase from Bacillus subtilis?, International Journal of Biological Macromolecules, vol. 50, no. 1, pp. 25-30, 2012.

R.  Gupta and Prabhune, A., ?Structural determination and chemical esterification of the sophorolipids produced by Candida bombicola grown on glucose and alpha-linolenic acid?, Biotechnology Letters, vol. 34, no. 4, pp. 701-707, 2012.

K.  Joshi-Navare and Prabhune, A., ?Biosurfactant-sophorolipid acts in synergy with antibiotics to enhance their efficiency?, Biomed Research International, p. 512495, 2013.

P.  Singh, Joshi, K., Guin, D., and Prabhune, A., ?Chemically conjugated sophorolipids on CdTe QDs: a biocompatible photoluminescence nanocomposite for theranostic applications?, RSC Advances, vol. 3, no. 44, pp. 22319-22325, 2013.

R.  Mukherji, Joshi-Navare, K., and Prabhune, A., ?Crystalline xylitol production by a novel yeast, pichia caribbica (HQ222812), and its application for quorum sensing inhibition in gram-negative marker strain chromobacterium violaceum CV026?, Applied Biochemistry and Biotechnology, vol. 169, no. 6, pp. 1753-1763, 2013.

A.  Hande, Mahajan, S. A., and Prabhune, A., ?Evaluation of ethanol production by a new isolate of yeast during fermentation in synthetic medium and sugarcane bagasse hemicellulosic hydrolysate?, Annals of Microbiology, vol. 63, no. 1, pp. 63-70, 2013.

P. Kumar Singh, Mukherji, R., Joshi-Navare, K., Banerjee, A., Gokhale, R., Nagane, S., Prabhune, A., and Ogale, S., ?Fluorescent sophorolipid molecular assembly and its magnetic nanoparticle loading: a pulsed laser process?, Green Chemistry, vol. 15, no. 4, pp. 943-953, 2013.

S.  Balakrishna and Prabhune, A., ?Gamma-glutamyl transferases: a structural, mechanistic and physiological perspective?, Frontiers in Biology, vol. 9, no. 1, pp. 51?65, 2013.

P.  Singh, Prabhune, A., Ogale, S. B., and Guin, D., ?Glucose oxidase conjugated H2O2 sensitive CdTe QDs: an effective fluorescence tool for glucose sensing?, Journal of Materials Chemistry B, vol. 1, no. 47, pp. 6538-6543, 2013.

R.  Mukherji, Samanta, A., Illathvalappil, R., Chowdhury, S., Prabhune, A., and R. Devi, N., ?Selective imaging of quorum sensing receptors in bacteria using fluorescent Au nanocluster probes surface functionalized with signal molecules?, ACS Applied Materials & Interfaces, vol. 5, no. 24, pp. 13076-13081, 2013.

B. V. Bhaskar Rao, Mukherji, R., Shitre, G., Alam, F., Prabhune, A., and Kale, S. N., ?Controlled release of antimicrobial Cephalexin drug from silica microparticles?, Materials Science & Engineering C-Materials for Biological Applications, vol. 34, pp. 9-14, 2014.

S.  Balakrishna and Prabhune, A., ?Effect of pH on the hydrolytic kinetics of gamma-glutamyl transferase from bacillus subtilis?, Scientific World Journal, p. 216270, 2014.

P. Kumar Singh, Wani, K., Kaul-Ghanekar, R., Prabhune, A., and Ogale, S., ?From micron to nano-curcumin by sophorolipid co-processing: highly enhanced bioavailability, fluorescence, and anti-cancer efficacy?, RSC Advances, vol. 4, no. 104, pp. 60334-60341, 2014.

P.  Bhange, Sridevi, N., Bhange, D. S., Prabhune, A., and Ramaswamy, V., ?Immobilization of bile salt hydrolase enzyme on mesoporous SBA-15 for co-precipitation of cholesterol?, International Journal of Biological Macromolecules, vol. 63, pp. 218-224, 2014.

R.  Mukherji, Varshney, N. Kumar, Panigrahi, P., Suresh, C. G., and Prabhune, A., ?New role for penicillin acylases: degradation of acyl homoserine lactone quorum sensing signals by Kluyvera citrophila penicillin G acylase?, Enzyme and Microbial Technology , vol. 56, pp. 1-7, 2014.

K.  Joshi-Navare, Singh, P. Kumar, and Prabhune, A., ?New yeast isolate Pichia caribbica synthesizes xylolipid biosurfactant with enhanced functionality?, European Journal of Lipid Science and Technology, vol. 116, no. 8, pp. 1070-1079, 2014.

R.  Mukherji and Prabhune, A., ?Novel glycolipids synthesized using plant essential oils and their application in quorum sensing inhibition and as antibiofilm agents?, Scientific World Journal, no. 3, p. 890709, 2014.

P. Kumar Singh, Wani, K., Kaul-Ghanekar, R., Prabhune, A., and Ogale, S., ?From micron to nano-curcumin by sophorolipid co-processing: highly enhanced bioavailability, fluorescence, and anti-cancer efficacy (vol 4, pg 60334, 2014)?, RSC Advances, vol. 5, no. 28, p. 22075, 2015.

P.  Dubey, Nawale, L., Sarkar, D., Nisal, A., and Prabhune, A., ?Mechanistic understanding of rapid gelation of silk fibroin using a biosurfactant ? sophorolipid?, in National Science Day, At CSIR-NCL, National Chemical Laboratory, Pune  India, 2015.

R.  Mukherji and Prabhune, A., ?New class of bacterial quorum sensing antagonists: glycomonoterpenols synthesized using linalool and alpha terpineol?, World Journal of Microbiology & Biotechnology, vol. 31, no. 6, pp. 841-849, 2015.

R.  Mukherji and Prabhune, A., ?Possible correlation between bile salt hydrolysis and ahl deamidation: staphylococcus epidermidis RM1, a potent quorum quencher and bile salt hydrolase producer?, Applied Biochemistry and Biotechnology, vol. 176, no. 1, pp. 140-150, 2015.

P. Kumar Singh, Prabhune, A., and Ogale, S., ?Pulsed laser-driven molecular self-assembly of cephalexin: aggregation-induced fluorescence and its utility as a mercury ion sensor?, Photochemistry and Photobiology, vol. 91, no. 6, pp. 1340-1347, 2015.

P.  Dubey, Nawale, L., Sarkar, D., Nisal, A., and Prabhune, A., ?Sophorolipid assisted tunable and rapid gelation of silk fibroin to form porous biomedical scaffolds?, RSC Advances, vol. 5, no. 43, pp. 33955-33962, 2015.

P. Kumar Singh, Bhardwaj, K., Dubey, P., and Prabhune, A., ?UV-assisted size sampling and antibacterial screening of lantana camara leaf extract synthesized silver nanoparticles?, RSC Advances, vol. 5, no. 31, pp. 24513-24520, 2015.

P. A.  Darne, Mehta, M. R., Agawane, S. B., and Prabhune, A., ?Bioavailability studies of curcumin-sophorolipid nano-conjugates in the aqueous phase: role in the synthesis of uniform gold nanoparticles?, RSC Advances, vol. 6, no. 72, pp. 68504-68514, 2016.

M.  Borsanyiova, Patil, A., Mukherji, R., Prabhune, A., and Bopegamage, S., ?Biological activity of sophorolipids and their possible use as antiviral agents?, Folia Microbiologica, vol. 61, no. 1, pp. 85-89, 2016.

K.  Wani, Shah, N., Prabhune, A., Jadhav, A., Ranjekar, P., and Kaul-Ghanekar, R., ?Evaluating the anticancer activity and nanoparticulate nature of homeopathic preparations of Terminalia chebula?, Homeopathy, vol. 105, no. 4, pp. 318-326, 2016.

N.  Singh, Patil, A., Prabhune, A., and Goel, G., ?Inhibition of quorum-sensing-mediated biofilm formation in Cronobacter sakazakii strains?, Microbiology-SGM, vol. 162, no. 9, pp. 1708-1714, 2016.

P. Devi Philem, Sonalkar, V. V., Dharne, M. S., and Prabhune, A., ?Purification and partial characterization of novel penicillin V acylase from Acinetobacter sp AP24 isolated from loktak lake, an indo-burma biodiversity hotspot?, Preparative Biochemistry & Biotechnology, vol. 46, no. 5, pp. 524-530, 2016.

P.  Dubey, Kumar, S., Aswal, V. K., Ravindranathan, S., Rajamohanan, P. R., Prabhune, A., and Nisal, A., ?Silk fibroin-sophorolipid gelation: deciphering the underlying mechanism?, Biomacromolecules, vol. 17, no. 10, pp. 3318-3327, 2016.

L.  Nawale, Dubey, P., Chaudhari, B., Sarkar, D., and Prabhune, A., ?Anti-proliferative effect of novel primary cetyl alcohol derived sophorolipids against human cervical cancer cells HeLa?, Plos One, vol. 12 , no. 4, p. e0174241, 2017.

A.  Patil, Joshi-Navre, K., Mukherji, R., and Prabhune, A., ?Biosynthesis of glycomonoterpenes to attenuate quorum sensing associated virulence in bacteria?, Biotechnology and Applied Biochemistry, vol. 181 , no. 4, pp. 1533-1548, 2017.

M. R. Shadab Khan, Salunkhe, P., Satpute, S., Kendurkar, S., Prabhune, A., Deval, A., and Chaudhari, B. P., ?Rapid synthesis of highly monodispersed silver nanoparticles from the leaves of Salvadora persica?, Materials Letters, vol. 205, pp. 226-229, 2017.

S.  Mitra, Kandambeth, S., Biswal, B. P., Khayum, A. M., Choudhury, C. Kumar, Mehta, M. R., Kaur, G., Banerjee, S., Prabhune, A., Verma, S., Roy, S., Kharul, U. K., and Banerjee, R., ?Self-exfoliated guanidinium-based ionic covalent organic nanosheets (iCONs)?, Journal of the American Chemical Society, vol. 138, no. 8, pp. 2823-2828, 2017.

P.  Dubey, Kumar, S., Ravindranathan, S., Vasudevan, S., Aswal, V. K., Rajamohanan, P. R., Nisal, A., and Prabhune, A., ?pH dependent sophorolipid assemblies and their influence on gelation of silk fibroin protein?, Materials Chemistry and Physics, vol. 203, pp. 9-16, 2018.

S.  Sanghi, Chirmade, T., More, S., Prabhune, A., Gupta, V., and Kadoo, N., ?Effect of media components and growth conditions for improved linoleic acid production by beauveria species?, Journal of the  American Oil Chemists Society, vol. 96, no. 8, pp. 945-954, 2019.

S.  V. More, Koratkar, S. S., Kadam, N., Agawane, S., and Prabhune, A., ?Formulation and evaluation of wound healing activity of sophorolipid-sericin gel in wistar rats?, Pharmacognosy Magazine, vol. 15, no. 62, pp. 123-127, 2019.

S.  Hirlekar, Ray, D., Aswal, V. K., Prabhune, A., Nisal, A., and Ravindranathan, S., ?Silk fibroin-sodium dodecyl sulfate gelation: molecular, structural, and rheological insights?, Langmuir, vol. 35, no. 46, pp. 14870-14878, 2019.

P. D.  Philem, Yadav, Y., Sunder, A. Vellore, Ghosh, D., Prabhune, A., and Ramasamy, S., ?Structural and enzymatic analysis of a dimeric cholylglycine hydrolase like acylase active on N-acyl homoserine lactones?, Biochimie, vol. 177, pp. 108-116, 2020.

D.  Dasgupta, Sidana, A., Ghosh, P., Sharma, T., Singh, J., Prabhune, A., More, S., Bhaskar, T., and Ghosh, D., ?Energy and life cycle impact assessment for xylitol production from corncob?, Journal of Cleaner Production, vol. 278, p. 123217, 2021.

Z.  Motiwala, Darne, P., Prabhune, A., Inamdar, M. S., and Kulkarni, K., ?Expression, purification and crystallization of Asrij, A novel scaffold transmembrane protein?, Journal of Membrane Biology, vol. 254, no. 1, pp. 65-74, 2021.

S.  Hirlekar, Abhyankar, I., Kane, K., Trimukhe, K., Prabhune, A., and Nisal, A., ?Green antibacterial molecules: sophorolipids with varying fatty acid chain?, Trends in Biomaterials and Artificial Organs, vol. 35, p. 431+, 2021.

I.  Abhyankar, Hirlekar, S., Prabhune, A., and Nisal, A., ?Bridging the gap: an investigation of biosurfactants-polymer systems?, Current Opinion in Colloid & Interface Science, vol. 72, p. 101806, 2024.