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R.  Godbole, Gaur, A., Nayar, P., Kiruthiga, K., D'Costa, P., Manchanda, R., Khilari, A., Shanmugam, D., Muglikar, K. D., and Kundu, K., ?Case report: a fatal case of babesiosis in a splenectomized male patient from Western India?, American Journal of Tropical Medicine and Hygiene, vol. 106, no. 5, pp. 1421-1425, 2022.

D.  Niveditha, Khan, S., Khilari, A., Nadkarni, S., Bhalerao, U., Kadam, P., Yadav, R., Kanekar, J. B., Shah, N., Likhitkar, B., Sawant, R., Thakur, S., Tupekar, M., Nagar, D., Rao, A. G., Jagtap, R., Jogi, S., Belekar, M., Pathak, M., Shah, P., Ranade, S., Phadke, N., Das, R., Joshi, S., Karyakarte, R., Ghose, A., Kadoo, N., Shashidhara, L. S., Monteiro, J. Merwin, Shanmugam, D., Raghunathan, A., and Karmodiya, K., ?Tale of two waves: Delineating diverse genomic and transmission landscapes driving the COVID-19 pandemic in Pune, India?, Journal of Infection and Public Health, vol. 16, no. 8, pp. 1290-1300, 2023.

V. D.  Navale, Yadav, R., Khilari, A., Dharne, M., Shanmugam, D., and Vamkudoth, K. Rao, ?Dietary supplementation of lactococcus lactis subsp. lactis BIONCL17752 on growth performance, and gut microbiota of broiler chickens?, Probiotics and Antimicrobial Proteins, 2024.

D.  Purkayastha, Pandit, K., Upadrasta, S., Khilari, A., Shanmugam, D., and Karmodiya, K., ?32nd National Congress of Parasitology, Pune: bringing together India's parasitologists?, Trends in Parasitology, vol. 41, no. 1, pp. 1-7, 2025.

M.  Bajpai, Khilari, A., Likhitkar, B., Musale, P., Jadhav, S., Dhanikachalam, V., Kakramkar, P., Bhave, K., Swaminathan, M., Joshi, S., and Shanmugam, D., ?Detection and variant characterization of lumpy skin disease virus from dairy cattle in India?, Virus Evolution, vol. 11, no. 1, p. veaf090, 2025.

P.  Musale, Khilari, A., Gade, R., Dhanikachalam, V., Jadhav, S., Bajpai, M., Turakani, B., Joshi, A., Prajapati, A., Srivastava, A., Swaminathan, M., Joshi, S., and Shanmugam, D., ?Identification of genetic variations linked to buparvaquone resistance in Theileria annulata infecting dairy cattle in India?, Plos One, vol. 20, no. 7, p. e0326243, 2025.

A.  Khilari, Sharma, S., Bajpai, M., K. Viswan, A., Chaturvedi, R., Mirdha, B. R., Rahi, M., Sharma, A., and Shanmugam, D., ?Targeted genomic surveillance unveils genetic variations linked to regional malaria drug resistance dynamics in India?, Open Forum Infectious Diseases, vol. 13, no. 3, p. ofag106, 2026.