02446nas a2200301 4500008004100000022001400041245017500055210006900230260000800299300001100307490000800318520142700326653002301753653000901776653002401785653002401809653001501833653000901848100002201857700002301879700001601902700001801918700002101936700002001957700001901977700001901996856012902015 2020 eng d a1470-160X00aMetagenome sequencing to unveil microbial community composition and prevalence of antibiotic and metal resistance genes in hypersaline and hyperalkaline Lonar Lake, India0 aMetagenome sequencing to unveil microbial community composition cMAR a1058270 v1103 a
Lonar Lake (India) is a hyperalkaline and hypersaline soda lake encompassing unique microbial composition and functions. This ecosystem has not been explored for taxonomic diversity and functional aspects (with emphasis on antibiotic and metal resistance genes) using whole metagenome sequencing for multiple years. Bacterial diversity analysis during year 2013, 2016, and 2018 depicted differences in the dominance of Proteobacteria, Firmicutes and Bacteroidetes. For archaeal diversity, a similar pattern persisted with higher abundance of Euryarchaeota. Functional metagenome analyses, indicated presence of antibiotic resistance gene (ARG) and metal resistance gene (MRG) profiles in the lake. A wider continuum of resistance genes with dominant ARG types as multidrug resistance efflux pumps and beta-lactams were also observed. The lake resistome demonstrated fluoroquinolone and acriflavine resistance genes indicating sewage water contamination in the lake. The MRGs linked with resistance to toxic metals (arsenic, cobalt, cadmium, copper, and zinc) and cation efflux protein CusA and cobalt-zinc-cadmium resistance protein revealed metal contamination. This study could be a baseline for understanding prevalence of antibiotic and metal resistance mechanisms resulting from various anthropogenic activities nearby lake, and find integrated approaches for conservation of the precious Lonar Lake ecosystem.
10aArchaeal diversity10aARGs10aBacterial diversity10aIllumina sequencing10aLonar lake10aMRGs1 aChakraborty, Jaya1 aSapkale, Vibhavari1 aShah, Manan1 aRajput, Vinay1 aMehetre, Gajanan1 aAgawane, Sachin1 aKamble, Sanjay1 aDharne, Mahesh uhttp://library.ncl.res.in/content/metagenome-sequencing-unveil-microbial-community-composition-and-prevalence-antibiotic-and